ATL_FISHREF_12S_mitochondrial_tree_156sequences.pdf

Descrizione

Mitochondrial tree based on the 12s sequences obtained for altantic fish. This data represent the maximum likelihood phylogenetic tree allowing to assess 1) the clustering of the different sequences generated in this study and their closest sequences recovered through a MegaBLAST on GenBank, 2) the robustness of the clades and 3) the phylogenetic dissimilarities through the branch length of the tree among the different sequences. This tree was built with IQtree2 using the best substitution model found by modelFinder. The robustness of the node was evaluated using 1000 ultra-fast bootstrap (node information indicated on the right of the /) and SH-aLRT procedures (node information indicated on the left of the /), using a hillclimbing nearest neighbor interchange (NNI) search to reduce the risk of overestimating branch supports with ultra-fast Bootstrap caused by too severe model violations.